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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44143141_44146846_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44143141 - 44146846

Intron Length:

3706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

ATTGTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTTTGTTTTATT

Flanking Amino Acid:

QFDDAVSITVEYRSEKSLEE

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

74.8

35.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

83.6

0.76

0.8

77.6

36.1

Minor 5ss

32.7

-2

3.1

39.8

40.4

Minor BPS

52.3

0.15

2.1

74.98

42.6

Associated Gene:

Gene:

ATP2C1

Ensembl Gene ID:

ENSAPLG00000010766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004952

44138733 - 44173584

34852