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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44151300_44153032_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

44151300 - 44153032

Intron Length:

1733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

ACCATTCACCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

TGCTTGTTAACT

Flanking Amino Acid:

EVFKMMQAEEAPKTPLQKSM

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

51.9

0.04

1.1

49.1

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

62.3

0.46

2.1

79.89

42.3

Associated Gene:

Gene:

ATP2C1

Ensembl Gene ID:

ENSAPLG00000010766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035723

44136785 - 44173584

36800

ENSAPLT00000032170

44136785 - 44172542

35758

ENSAPLT00000011254

44135711 - 44173584

37874

ENSAPLT00000004952

44138733 - 44173584

34852