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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44156021_44157484_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44156021 - 44157484

Intron Length:

1464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

TTTGTCTTACAG

Flanking Amino Acid:

IFTSDGQHAEVTGVGYNRFG

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

77.9

36.9

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

86.1

0.81

0.8

79.9

32.2

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

52.6

-0

1.9

63.72

44.3

Associated Gene:

Gene:

ATP2C1

Ensembl Gene ID:

ENSAPLG00000010766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032170

44136785 - 44172542

35758

ENSAPLT00000011254

44135711 - 44173584

37874

ENSAPLT00000004952

44138733 - 44173584

34852

ENSAPLT00000035723

44136785 - 44173584

36800