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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44157779_44159142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44157779 - 44159142

Intron Length:

1364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

CTTACATTATGT

Flanking Amino Acid:

EGALIALAMKMGLDGIQEDY

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

80.5

33.9

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

78.3

0.64

0.9

73.5

Minor 5ss

31.5

-2.1

42.7

44.3

Minor BPS

47.2

-0.1

2.2

69.71

46.7

Associated Gene:

Gene:

ATP2C1

Ensembl Gene ID:

ENSAPLG00000010766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032170

44136785 - 44172542

35758

ENSAPLT00000011254

44135711 - 44173584

37874

ENSAPLT00000004952

44138733 - 44173584

34852

ENSAPLT00000035723

44136785 - 44173584

36800