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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44166917_44167518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44166917 - 44167518

Intron Length:

602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TTTTTAATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGGTTTTTAATT

Flanking Amino Acid:

ILVDDDFQTIMSAIEEGKGI

Intron Amino Acid Position:

693

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.5

38.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.7

0.85

0.8

82.6

32.6

Minor 5ss

34.1

-1.8

3.5

47.1

42.3

Minor BPS

72.2

0.78

1.1

79.65

37.1

Associated Gene:

Gene:

ATP2C1

Ensembl Gene ID:

ENSAPLG00000010766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004952

44138733 - 44173584

34852

ENSAPLT00000035723

44136785 - 44173584

36800

ENSAPLT00000032170

44136785 - 44172542

35758

ENSAPLT00000011254

44135711 - 44173584

37874