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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44411346_44415539_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

44411346 - 44415539

Intron Length:

4194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGTTTTGC

5'SS Class:

weak_major

3'SS Sequence:

TTTCCCAGAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

TTTCCCAGAACA

Flanking Amino Acid:

IVILNQCKVFHHNTLTFLLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.5

0.06

1.1

49.4

35.6

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

67.4

0.39

63.1

Minor 5ss

43.8

-0.7

2.7

57.6

41.6

Minor BPS

63.2

0.41

1.8

79.55

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036086

44409447 - 44459660

50214