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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44485453_44554509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44485453 - 44554509

Intron Length:

69057

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCATTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TCTTTTCCATTT

Flanking Amino Acid:

KMQSHGQWFEVDRTEVIRTC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

75.4

0.57

72.4

37.4

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

43.8

-0.3

63.73

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029765

44485237 - 44554689

69453