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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44672219_44675548_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44672219 - 44675548

Intron Length:

3330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GTCACTTCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TCTTCTGTCACT

Flanking Amino Acid:

RQHGYGQLTKLGIQQQYELG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.6

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

75.7

0.58

0.9

68.5

37.3

Minor 5ss

44.5

-0.6

2.7

57.3

47.4

Minor BPS

52.3

0.15

2.4

78.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039175

44671707 - 44678705

6999

ENSAPLT00000006430

44669536 - 44685194

15659