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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44693697_44698030_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

44693697 - 44698030

Intron Length:

4334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTAGA

5'SS Class:

major

3'SS Sequence:

GGAATTTTACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

AERELKFVAVVFRHGDRTPI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

73.5

37.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

59.6

0.22

1.1

51.9

46.7

Minor 5ss

-1.5

2.7

38.5

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006016

44693583 - 44711219

17637