Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_44757678_44758525_F

Intron Information:

Intron Rank:

24929

Intron Class:

major

Intron Phase:

Intron Coordinates:

44757678 - 44758525

Intron Length:

848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTTCAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

CCCCTTTCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

75.1

35.1

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

0.25

30.6

Minor 5ss

33.7

-1.9

3.2

40.4

Minor BPS

44.1

-0.4

1.5

45.06

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005052

44747627 - 44794038

46412