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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44814894_44816930_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44814894 - 44816930

Intron Length:

2037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTCTTTTTAATT

Flanking Amino Acid:

MKQHVYPAEKEIIEYYARHG

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.7

0.71

0.7

81.5

30.6

Minor 5ss

32.4

-2

3.5

48.3

47.4

Minor BPS

0.74

1.2

78.3

39.3

Associated Gene:

Gene:

ACAD11

Ensembl Gene ID:

ENSAPLG00000004264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004429

44796387 - 44823875

27489