Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_44817306_44818009_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44817306 - 44818009

Intron Length:

704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACAC

5'SS Class:

major

3'SS Sequence:

TTTTTGGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TATGCCTTTATT

Flanking Amino Acid:

SFFKMAGISQGVYARYLIGN

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

40.1

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

81.6

0.71

0.9

77.2

37.1

Minor 5ss

37.8

-1.4

3.1

50.8

45.8

Minor BPS

65.3

0.56

1.7

80.78

41.1

Associated Gene:

Gene:

ACAD11

Ensembl Gene ID:

ENSAPLG00000004264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004429

44796387 - 44823875

27489