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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44824494_44825013_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44824494 - 44825013

Intron Length:

520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGGCCC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

TTCTGCATAACA

Flanking Amino Acid:

SAEVTDSNPYSRLMALKRMG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

57.6

41.5

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

92.1

0.95

0.5

89.1

19.9

Minor 5ss

25.5

-2.8

3.2

33.6

41.9

Minor BPS

59.9

0.31

2.1

76.13

41.2

Associated Gene:

Gene:

UBA5

Ensembl Gene ID:

ENSAPLG00000004094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004256

44824357 - 44842663

18307