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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44825293_44826422_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

44825293 - 44826422

Intron Length:

1130

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATA|GCAGATGGA

5'SS Class:

weak_major

3'SS Sequence:

ATTTTTATTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTAATGCAATT

Flanking Amino Acid:

VGIFFFYLIILLLFDYDKVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.1

1.3

55.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.1

0.75

0.8

78.9

33.6

Minor 5ss

21.5

-3.3

4.1

30.9

38.5

Minor BPS

42.1

-0.5

2.2

62.62

41.7

Associated Gene:

Gene:

UBA5

Ensembl Gene ID:

ENSAPLG00000004094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004256

44824357 - 44842663

18307