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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44839283_44840503_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44839283 - 44840503

Intron Length:

1221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

GTTTCTCTATTT

Flanking Amino Acid:

VAGILVQNVLKYLLNFGTVS

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.5

28.6

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

81.1

0.7

0.9

73.5

41.9

Minor 5ss

-1.2

3.3

52.8

38.5

Minor BPS

54.7

0.23

1.9

77.23

39.6

Associated Gene:

Gene:

UBA5

Ensembl Gene ID:

ENSAPLG00000004094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004256

44824357 - 44842663

18307