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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44862229_44863549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44862229 - 44863549

Intron Length:

1321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTATA

5'SS Class:

major

3'SS Sequence:

GTCTCTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

GTCTCTTTTACA

Flanking Amino Acid:

NSTCELGFEKYFERLNDLVA

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

80.8

33.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

85.1

0.79

0.8

79.3

32.7

Minor 5ss

39.6

-1.2

3.1

50.6

40.3

Minor BPS

64.9

0.46

1.6

71.82

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003855

44859436 - 44872402

12967