Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_45114381_45117879_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45114381 - 45117879

Intron Length:

3499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

AACCTTGTACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAG

U12 Branch Point Sequence:

ACAGCCATAACC

Flanking Amino Acid:

AETGALLRTKQQAEATAAVR

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.7

33.8

Major BPS

63.6

0.34

1.5

63.1

44.4

Major PPT

63.2

0.3

43.8

Minor 5ss

39.7

-1.2

2.8

49.8

46.2

Minor BPS

54.9

0.13

1.8

62.64

42.5

Associated Gene:

Gene:

BFSP2

Ensembl Gene ID:

ENSAPLG00000001210

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048446

45104537 - 45118930

14394

ENSAPLT00000001349

45104537 - 45118930

14394