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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45142552_45142840_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45142552 - 45142840

Intron Length:

289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTGTTTTAATT

Flanking Amino Acid:

RRLLQSGGAKVFSGHSASFF

Intron Amino Acid Position:

1369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

35.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.4

0.62

40.3

Minor 5ss

45.4

-0.5

2.5

59.2

45.4

Minor BPS

68.4

0.66

1.3

79.54

37.3

Associated Gene:

Gene:

TOPBP1

Ensembl Gene ID:

ENSAPLG00000010008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010443

45141866 - 45162256

20391