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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45142931_45143809_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45142931 - 45143809

Intron Length:

879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTAGA

5'SS Class:

major

3'SS Sequence:

GTTTCTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TTGTAGTAAATT

Flanking Amino Acid:

KGRQETGIAEGAFSGWKVIL

Intron Amino Acid Position:

1339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

72.5

38.4

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

81.4

0.71

0.8

74.1

36.7

Minor 5ss

41.3

-1

2.5

51.9

44.5

Minor BPS

-0.1

2.4

72.29

45.1

Associated Gene:

Gene:

TOPBP1

Ensembl Gene ID:

ENSAPLG00000010008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010443

45141866 - 45162256

20391