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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45143951_45144842_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45143951 - 45144842

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

ATGATTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTCTTTGTAATT

Flanking Amino Acid:

ACRAAGCFVQEEDYEWGNNS

Intron Amino Acid Position:

1292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.9

80.1

38.1

Major BPS

84.6

0.86

41.2

Major PPT

67.7

0.4

58.7

46.6

Minor 5ss

31.8

-2.1

3.7

44.4

43.7

Minor BPS

58.2

0.34

78.3

39.3

Associated Gene:

Gene:

TOPBP1

Ensembl Gene ID:

ENSAPLG00000010008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010443

45141866 - 45162256

20391