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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45155172_45155972_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45155172 - 45155972

Intron Length:

801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATCTCAATC

Flanking Amino Acid:

VGDVVTNTWLVTCVEEQVLL

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.3

0.64

0.9

83.9

24.8

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

64.8

0.45

1.5

75.07

35.4

Associated Gene:

Gene:

TOPBP1

Ensembl Gene ID:

ENSAPLG00000010008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010443

45141866 - 45162256

20391