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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45159026_45159750_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

45159026 - 45159750

Intron Length:

725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAACTC

5'SS Class:

major

3'SS Sequence:

TTAAACTTGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTTATTTAAAC

Flanking Amino Acid:

CTHLIVQEPKGQKYECARKW

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

63.2

41.7

Major BPS

81.6

0.78

0.8

24.9

Major PPT

55.3

0.12

1.2

56.2

43.2

Minor 5ss

34.5

-1.8

3.6

50.3

46.3

Minor BPS

70.3

0.62

1.5

80.76

33.2

Associated Gene:

Gene:

TOPBP1

Ensembl Gene ID:

ENSAPLG00000010008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010443

45141866 - 45162256

20391