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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45161869_45162172_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45161869 - 45162172

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

ATGTAGTTATAT

Flanking Amino Acid:

SSGCFWQALESIKEFQSEEH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

73.5

0.58

79.3

29.4

Major PPT

86.8

0.83

0.7

81.7

30.4

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

43.3

-0.4

2.4

64.6

45.3

Associated Gene:

Gene:

TOPBP1

Ensembl Gene ID:

ENSAPLG00000010008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010443

45141866 - 45162256

20391