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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45269409_45269832_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
45269409 - 45269832

Intron Length:
424

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTGGCATC

5'SS Class:
major

3'SS Sequence:
TGTCTCTCTGTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
ATTTCTCTAACT

Flanking Amino Acid:
FLEERLIELIRDKDALWQKS

Intron Amino Acid Position:
1061

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.5
0.46
1.2
68.3
42.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
78.9
0.65
0.8
74
31.1

Minor 5ss
38.9
-1.2
3.1
51.9
45

Minor BPS
74.6
0.85
1.6
91.26
31.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

45262945 - 45269995
7051

45252373 - 45274452
22080