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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45288023_45290483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45288023 - 45290483

Intron Length:

2461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TATTGAATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TTGTATTGAATT

Flanking Amino Acid:

SEDTPLDQCKVLIPMTRCNS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

71.9

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

74.2

0.54

63.8

45.8

Minor 5ss

36.3

-1.6

3.2

50.3

39.7

Minor BPS

60.2

0.4

1.6

77.61

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025041

45287744 - 45291881

4138