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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45335556_45337236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45335556 - 45337236

Intron Length:

1681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTGCTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TCTGTTTTATTT

Flanking Amino Acid:

PKVKSKKREAVAGRGRGRGR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

1.1

79.9

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

69.4

0.44

1.1

75.3

38.6

Minor 5ss

40.2

-1.1

2.7

46.3

Minor BPS

53.6

0.19

1.7

70.13

42.3

Associated Gene:

Gene:

SNRPD1

Ensembl Gene ID:

ENSAPLG00000012256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012753

45335479 - 45339964

4486