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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45337429_45339714_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45337429 - 45339714

Intron Length:

2286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGGCGC

5'SS Class:

major

3'SS Sequence:

TGTGTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAAAAT

U12 Branch Point Sequence:

CATCCGTGAAAA

Flanking Amino Acid:

NGTQVHGTITGVDVSMNTHL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.2

52.3

41.5

Major BPS

55.4

0.14

1.3

61.7

41.5

Major PPT

0.67

76.9

42.1

Minor 5ss

29.3

-2.4

3.5

32.6

42.6

Minor BPS

44.8

-0.4

2.2

56.54

41.9

Associated Gene:

Gene:

SNRPD1

Ensembl Gene ID:

ENSAPLG00000012256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012753

45335479 - 45339964

4486