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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45341871_45342289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45341871 - 45342289

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACG|GCAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TCTGGCTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TTCAGCTGAATT

Flanking Amino Acid:

FGTFAIILYNGGSSDAVHIS

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

1.2

85.1

32.4

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

69.5

0.44

1.1

64.3

41.6

Minor 5ss

28.4

-2.5

4.2

49.4

46.6

Minor BPS

52.7

0.16

1.9

73.39

43.7

Associated Gene:

Gene:

SACM1L

Ensembl Gene ID:

ENSAPLG00000012273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030827

45341800 - 45361092

19293