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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45342374_45343120_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45342374 - 45343120

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TGACTCTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TGACTCTTAACA

Flanking Amino Acid:

SMCIICLLMAGDTWTETLAY

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

74.9

36.2

Major BPS

70.8

0.52

70.6

31.6

Major PPT

70.9

0.47

65.9

39.5

Minor 5ss

40.7

-1

2.8

49.7

41.9

Minor BPS

72.3

0.7

1.2

74.59

36.1

Associated Gene:

Gene:

SACM1L

Ensembl Gene ID:

ENSAPLG00000012273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030827

45341800 - 45361092

19293

ENSAPLT00000012831

45342237 - 45362819

20583