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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45343179_45343856_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45343179 - 45343856

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

TTTCTTTCCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

TATCATGTAATT

Flanking Amino Acid:

HVKKDWKFLALPIIMVVAFS

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

71.2

40.3

Major BPS

79.4

0.73

80.1

Major PPT

0.74

0.7

77.4

31.3

Minor 5ss

36.8

-1.5

2.9

52.3

44.3

Minor BPS

48.4

-0

2.1

71.44

39.7

Associated Gene:

Gene:

SACM1L

Ensembl Gene ID:

ENSAPLG00000012273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030827

45341800 - 45361092

19293

ENSAPLT00000012831

45342237 - 45362819

20583