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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45344841_45345066_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45344841 - 45345066

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGAGCTTCAATA

Flanking Amino Acid:

ARRSLQAQLQRLGVLHVGQR

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

29.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

89.4

0.89

0.8

29.4

Minor 5ss

36.6

-1.5

3.4

45.2

Minor BPS

52.3

0.07

1.6

39.4

Associated Gene:

Gene:

SACM1L

Ensembl Gene ID:

ENSAPLG00000012273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030827

45341800 - 45361092

19293

ENSAPLT00000012831

45342237 - 45362819

20583