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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45349160_45349243_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

45349160 - 45349243

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

CCTTTATTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTTCCTTTATT

Flanking Amino Acid:

SYGKQMIVNLVNQKGSEKPL

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

73.2

38.4

Major BPS

71.2

0.53

70.3

31.9

Major PPT

81.7

0.71

0.8

77.1

30.4

Minor 5ss

0.71

2.2

78.5

38.4

Minor BPS

81.6

1.08

1.4

96.2

29.4

Associated Gene:

Gene:

SACM1L

Ensembl Gene ID:

ENSAPLG00000012273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030827

45341800 - 45361092

19293

ENSAPLT00000012831

45342237 - 45362819

20583