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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45349313_45349745_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45349313 - 45349745

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATGTGAG

5'SS Class:

major

3'SS Sequence:

CTTTCTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

ACATCTTAAATC

Flanking Amino Acid:

KPQISKSVNHMDGFQRHFDS

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

38.3

Major BPS

77.8

0.69

78.2

31.8

Major PPT

87.1

0.84

0.6

80.8

31.3

Minor 5ss

40.5

-1.1

3.2

52.7

44.8

Minor BPS

55.6

0.16

1.6

60.85

39.2

Associated Gene:

Gene:

SACM1L

Ensembl Gene ID:

ENSAPLG00000012273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030827

45341800 - 45361092

19293

ENSAPLT00000012831

45342237 - 45362819

20583