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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45427652_45428828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45427652 - 45428828

Intron Length:

1177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTAATATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATA

Flanking Amino Acid:

YLKREEIDFTGTEPVHLKTG

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.52

0.9

71.1

38.7

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

71.7

0.68

1.3

33.3

Associated Gene:

Gene:

LARS2

Ensembl Gene ID:

ENSAPLG00000013338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023130

45407486 - 45522521

115036

ENSAPLT00000045437

45417961 - 45522483

104523

ENSAPLT00000013922

45407486 - 45522521

115036

ENSAPLT00000039910

45411865 - 45522483

110619

ENSAPLT00000032834

45407854 - 45522521

114668

ENSAPLT00000032347

45407854 - 45522521

114668