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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45630388_45635683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45630388 - 45635683

Intron Length:

5296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTTTCGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

TTGCCAGTAATT

Flanking Amino Acid:

VVVQHPQIDENVTHLVDLSK

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

78.2

36.3

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

89.4

0.89

0.8

84.7

30.1

Minor 5ss

39.6

-1.2

2.8

49.5

40.3

Minor BPS

49.3

0.03

2.2

74.52

42.4

Associated Gene:

Gene:

CDCP1

Ensembl Gene ID:

ENSAPLG00000012011

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012495

45626662 - 45643247

16586