Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_45720699_45720964_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45720699 - 45720964

Intron Length:

266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGGACA

5'SS Class:

major

3'SS Sequence:

CAAACTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TTCTTTGCAACC

Flanking Amino Acid:

KLKWMSVDSVWNFHVWNDVW

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

65.2

40.3

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

69.8

0.45

39.2

Minor 5ss

31.6

-2.1

3.2

37.5

Minor BPS

48.2

-0.1

2.2

65.33

Associated Gene:

Gene:

TGM4

Ensembl Gene ID:

ENSAPLG00000012605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013157

45716633 - 45728440

11808