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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_45751530_45751999_R

Intron Information:

Intron Rank:
29
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
45751530 - 45751999
Intron Length:
470

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTACTAAGA
5'SS Class:
major
3'SS Sequence:
CTCACTTGCTTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATTCAA
U12 Branch Point Sequence:
ATTCAAATAAAT
Flanking Amino Acid:
AKNDEILRLKEHLSELENLR
Intron Amino Acid Position:
1203

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
71.4
0.5
1.1
64.7
41.2
Major BPS
83
0.82
0.8
83.9
25.3
Major PPT
65.8
0.36
0.9
64.7
36.3
Minor 5ss
31.8
-2.1
3.1
41.3
44.6
Minor BPS
45.3
-0.2
2
69.42
40

Associated Gene:

Gene:
KIF15
Ensembl Gene ID:
ENSAPLG00000012803
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000013432
45746350 - 45780986
34637