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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45801583_45804344_F

Intron Information:

Intron Rank:

138731

Intron Class:

major

Intron Phase:

Intron Coordinates:

45801583 - 45804344

Intron Length:

2762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TCCTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

CATTGTAAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.4

66.1

41.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

84.9

0.79

0.7

80.1

25.2

Minor 5ss

34.9

-1.7

3.1

40.5

38.7

Minor BPS

44.5

-0.3

2.2

65.36

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026040

45800677 - 45806264

5588