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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45834209_45834373_F

Intron Information:

Intron Rank:

131977

Intron Class:

major

Intron Phase:

Intron Coordinates:

45834209 - 45834373

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACACTAA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TTTGACTGTATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

64.6

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

92.2

0.95

0.5

92.5

17.5

Minor 5ss

41.4

-1

3.2

55.4

48.8

Minor BPS

46.9

-0.2

64.88

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033332

45833294 - 45835633

2340