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Intron Name: Anas_platyrhynchos_platyrhynchos_2_45856468_45865814_F

Intron Information:

Intron Rank:

143678

Intron Class:

major

Intron Phase:

Intron Coordinates:

45856468 - 45865814

Intron Length:

9347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TTCTCTTTGCTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

72.4

0.56

73.5

32.5

Major PPT

81.4

0.71

0.8

73.3

37.1

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

46.6

-0.1

3.4

78.04

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041363

45856028 - 45866169

10142