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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4600821_4607781_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4600821 - 4607781

Intron Length:

6961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

ATTGTCATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGACCTGAATA

Flanking Amino Acid:

PVEIDGTIHQVYVLKRPHVD

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

77.1

0.61

0.9

67.3

43.1

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

0.5

1.5

73.2

38.7

Associated Gene:

Gene:

CTDSPL

Ensembl Gene ID:

ENSAPLG00000030602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010273

4553987 - 4612877

58891

ENSAPLT00000019864

4542452 - 4612877

70426

ENSAPLT00000017425

4542452 - 4612877

70426