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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46103562_46125914_R


Intron Information:

Intron Rank:
32

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
46103562 - 46125914

Intron Length:
22353

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGTCTT

5'SS Class:
strong_major

3'SS Sequence:
CCTGTCTACATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTCTAC

U12 Branch Point Sequence:
CCTGTCTACATA

Flanking Amino Acid:
STNMMLLFTEGLASHICNLL

Intron Amino Acid Position:
1101

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.1
0.92
0.8
83.5
35.1

Major BPS
49.5
-0
1.4
50.2
44.9

Major PPT
66.2
0.36
0.9
61
34.2

Minor 5ss
46.2
-0.4
2.8
67.2
43.9

Minor BPS
42.3
-0.6
2
49.1
43.2

Associated Gene:

Gene:
ULK4

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46035045 - 46266003
230959

46089305 - 46266003
176699