About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_46126021_46160058_R

Intron Information:

Intron Rank:
31
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
46126021 - 46160058
Intron Length:
34038

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TTG|GTAAGAACT
5'SS Class:
strong_major
3'SS Sequence:
TTATTTATTGCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTTAT
U12 Branch Point Sequence:
TTTTATTTATTT
Flanking Amino Acid:
LFPALFQVILEHQDNILGNT
Intron Amino Acid Position:
1066

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
85.3
0.83
0.9
79.9
32.8
Major BPS
96.5
1.15
0.6
86
34.2
Major PPT
86.5
0.82
0.8
81.9
34.1
Minor 5ss
36.3
-1.6
3
48
41.5
Minor BPS
64.4
0.53
1.7
84.57
36.4

Associated Gene:

Gene:
ULK4
Ensembl Gene ID:
ENSAPLG00000013816
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000044566
46035045 - 46266003
230959
ENSAPLT00000014398
46089305 - 46266003
176699