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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46167_49267_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

46167 - 49267

Intron Length:

3101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

AAAAAATGTACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTTTCTTTAAAA

Flanking Amino Acid:

QQQATQNRTRSAKRRKMADK

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

73.1

0.58

79.6

29.1

Major PPT

53.2

0.07

1.1

43.6

45.5

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

82.7

1.02

1.1

88.66

27.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019825

3263 - 59790

56528

ENSAPLT00000018278

3263 - 59790

56528

ENSAPLT00000008903

3822 - 61680

57859

ENSAPLT00000046030

3263 - 59790

56528

ENSAPLT00000020394

3263 - 88619

85357