Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_46179424_46188534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46179424 - 46188534

Intron Length:

9111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TCCTCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATAATCTAAACC

Flanking Amino Acid:

PVLLTSHRTTVEDCVLPPLV

Intron Amino Acid Position:

953

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

66.8

44.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.9

0.63

0.8

76.4

32.3

Minor 5ss

-1.1

42.1

Minor BPS

56.7

0.19

1.7

66.09

39.2

Associated Gene:

Gene:

ULK4

Ensembl Gene ID:

ENSAPLG00000013816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044566

46035045 - 46266003

230959

ENSAPLT00000014398

46089305 - 46266003

176699