Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_46193179_46197120_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46193179 - 46197120

Intron Length:

3942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

ATCATCTGAAAT

Flanking Amino Acid:

HIVQELPGILGDILNALTNV

Intron Amino Acid Position:

844

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

84.8

0.78

0.7

81.6

30.4

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

0.17

1.6

69.2

41.2

Associated Gene:

Gene:

ULK4

Ensembl Gene ID:

ENSAPLG00000013816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044566

46035045 - 46266003

230959

ENSAPLT00000014398

46089305 - 46266003

176699