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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46201850_46206065_R


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
46201850 - 46206065

Intron Length:
4216

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGGTTT

5'SS Class:
major

3'SS Sequence:
TATTCCCACCAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAC

U12 Branch Point Sequence:
ATAATATTAACA

Flanking Amino Acid:
IHLQRLIQEKEFVTTITRLL

Intron Amino Acid Position:
757

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.4
0.53
1.2
73.3
37.9

Major BPS
81.9
0.79
0.8
81.9
25

Major PPT
60
0.23
1.1
57.8
37.6

Minor 5ss
45.1
-0.5
3.1
64.8
46.5

Minor BPS
59.3
0.29
1.6
68.75
36.7

Associated Gene:

Gene:
ULK4

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46035045 - 46266003
230959

46089305 - 46266003
176699