Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_46225016_46244598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46225016 - 46244598

Intron Length:

19583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATTT

Flanking Amino Acid:

ELRENVPVSEAIILLTELIR

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.1

82.3

32.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.4

0.82

0.7

85.8

27.2

Minor 5ss

51.2

0.04

2.5

70.2

40.4

Minor BPS

63.6

0.51

1.5

78.46

Associated Gene:

Gene:

ULK4

Ensembl Gene ID:

ENSAPLG00000013816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044566

46035045 - 46266003

230959

ENSAPLT00000014398

46089305 - 46266003

176699