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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46259919_46261235_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
46259919 - 46261235

Intron Length:
1317

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACAAGG

5'SS Class:
major

3'SS Sequence:
TTTATCCCTGTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
TTCTGTTTATCC

Flanking Amino Acid:
IIFCELTPGKILLEGRGSLK

Intron Amino Acid Position:
150

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.3
0.62
1.2
66.4
45.1

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
80
0.67
0.8
74.9
30.3

Minor 5ss
38.4
-1.3
2.9
49.5
46.3

Minor BPS
54.5
0.12
2
69.42
42.8

Associated Gene:

Gene:
ULK4

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46035045 - 46266003
230959

46089305 - 46266003
176699