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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46264661_46265387_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
46264661 - 46265387

Intron Length:
727

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTAAGTAAT

5'SS Class:
strong_major

3'SS Sequence:
AACTTTGTTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAAAAAT

U12 Branch Point Sequence:
TTCCCATTAAAA

Flanking Amino Acid:
KCKRAEITNWVRLTHEIRHK

Intron Amino Acid Position:
70

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.2
0.92
0.9
87
30

Major BPS
62.8
0.32
1.1
67.9
34.4

Major PPT
70.7
0.47
1
62.2
43.5

Minor 5ss
37
-1.5
2.8
43.1
43.9

Minor BPS
60.3
0.32
1.7
71.75
39.6

Associated Gene:

Gene:
ULK4

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46035045 - 46266003
230959

46089305 - 46266003
176699